Four distinct dimensions of failure — positional, qualitative, structural, behavioral — distribute unevenly across the LLM pipeline. Most failures cluster at the attention layer; behavioral failures emerge only downstream. Understanding which dimension produced a given failure tells you which layer of the stack can fix it — and which cannot be patched by prompting at all.
The atlas has three complementary maps. Map A places all 17 pathologies on a 2D grid where rows are dimensions (color-coded) and columns are pipeline stages where the failure surfaces. Empty cells are informative — they show that, e.g., behavioral pathologies never originate at the input stage. Map B isolates the canonical failure cascade — the "death spiral" that turns one upstream failure into a session-wide breakdown. Map C is the defensive architecture: a two-run verification pattern that addresses the four highest-severity pathologies simultaneously. Map D is the master matrix for filtered lookup. Map E is a qualitative simulator — pull a parameter slider to see which pathologies respond.
Click any node in Map A or Map B to open the detail panel (Layer 2: mechanism, when it strikes, mitigation effectiveness with concrete percentages). Inside that panel, reveal the prompt or architecture pattern as Layer 3 when you want concrete code. The single insight to walk away with: the attention layer alone hosts 7 of the 17 pathologies — it is the single most fragile component in a long-context system, and no single fix tier covers it.
CONFIRMED or NOT FOUND| Pathology | Dimension | Stage | Severity | Frequency | Prompt-fixable |
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